Outline of Syllabus
BE7:-Applied Bioinformatics
Topic
Duration (Hrs)
1
Basic concepts of Molecular Biology
12
2
Strings, Graphs and Algorithms
06
3
Pairwise and Multiple alignment
10
4
Database homology Search
08
5
DNA Sequence fragment assembly
04
6
Markov Chain
08
7
Hidden Markov Models
12
Lecture =60
Practical =60
Total class =120
Practical =60
Total class =120
BOOKS RECOMMENDED FOR READING AND REFERENCE
MAIN READING
- Setubal Joao and meidanis Joao, "Introduction to Computational Molecular Biology"
- Warren Ewens and Gregory R. Grant, "Stastical Methods in Bioinformatics an Introduction"
- R. Durbin, S. Eddy, A. Krogh and G. Mitchison, "Biological sequence Analysis"
SUPPLEMENTARY READING
- Attwood TK and Parry-Smith DJ, "Introduction to Bioinformatics"
- Andreas D. Baxevanis and B.F. Francis Ouellette, "Bioinformatics : A Practical Guide to the Analysis of Genes and Proteins"
- Martin Tompa. Lecture notes on Biological Sequence Analyisis. Department of Computer Science and Engineering.